Fulvia fulva isolate Race 5 Kim-Solanum lycopersicum cv. MoneyMaker i... - SRA

SRX24949864: Fulvia fulva isolate Race 5 Kim-Solanum lycopersicum cv. MoneyMaker interaction 4 dpi replicate 1
1 ILLUMINA (Illumina NovaSeq 6000) run: 147.6M spots, 44.6G bases, 12.7Gb downloads

Design: Cladosporium fulvum isolate Race 5 Kim was grown in half-strength potato dextrose agar for 2 weeks at 23C. Tomato plants (Solanum lycopersicum cv. Moneymaker) were performed by conidia spray-inoculations as previously described and infected leaves were harvested at 4 dpi. Collected samples were immediately frozen in liquid nitrogen and stored at -80C until RNA extraction. Samples were ground to a powder in liquid nitrogen, and total RNA was extracted using Trizol. Preparation and sequencing of the polyA-selected RNAseq libraries were outsourced to the DNA Technologies and Expression Analysis Core Laboratory at the UC Davis Genome Center.

Submitted by: University of California

Study: Fulvia fulva isolates Race 5 and Race 4 transcriptomes during host interaction

PRJNA1118412 • SRP514138 • All experiments • All runs

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Time course transcriptomes of Fulvia fulva isolates Race 5 Kim and Race 4 during interaction with Solanum lycopersicum cv. Moneymaker.

Sample: Compatible Fulvia fulva isolate Race 5 Kim-Solanum lycopersicum cv. MoneyMaker interaction at 4 days post-inoculation

SAMN41608925 • SRS21653583 • All experiments • All runs

Organism: Fulvia fulva

Library:

Name: CFR5_MM_dpi4_1

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 147.6M spots, 44.6G bases, 12.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR29437253	147,558,663	44.6G	12.7Gb	2024-06-17

ID:: 33286107

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